What data does VirtualFlyBrain MCP server provide?

The server provides access to Drosophila neuroscience data including neural anatomy, circuits, connectivity, and gene expression information from VirtualFlyBrain's curated database. It's designed for researchers querying fruit fly brain structure and function.

How do I connect to the VirtualFlyBrain MCP server?

The server is hosted at https://vfb3-mcp.virtualflybrain.org and uses HTTP transport. Configure your MCP client to connect to this endpoint to query Drosophila neuroscience data.

Is authentication required to use this MCP server?

The registry metadata does not specify authentication requirements. Check VirtualFlyBrain's documentation or try connecting to the hosted endpoint to determine if API keys or credentials are needed.

Can I use this server for non-research applications?

VirtualFlyBrain is a research resource focused on Drosophila neuroscience. Verify the data's licensing and terms of use on the VirtualFlyBrain website before integrating into commercial or non-academic projects.

What query formats does the server support?

The registry provides limited detail on query syntax. Consult VirtualFlyBrain's API documentation or schema documentation to learn the supported query formats and available data fields for neural and genetic queries.

MCP ServerHTTPOfficialv1.8.1

VirtualFlyBrain MCP Server

Query Drosophila neuroscience data including neural circuits, anatomy, and gene expression from VirtualFlyBrain's curated database. Built for researchers and developers integrating fruit fly brain datasets into analysis pipelines.

org.virtualflybrain/vfb3-mcp

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Hosted URL

https://vfb3-mcp.virtualflybrain.org

Transport

HTTP

Auth

No auth required

What the VirtualFlyBrain MCP server does

How models use it and what it is built for.

Connect to VirtualFlyBrain

Hosted endpoint — paste into any MCP client.

https://vfb3-mcp.virtualflybrain.org

Resources

Where to find authoritative docs and source for VirtualFlyBrain.

Example prompts for VirtualFlyBrain

Paste any of these into Agent Studio after connecting VirtualFlyBrain.

List all neurons in the Drosophila mushroom body with their connectivity data
Find genes expressed in the antennal lobe and return their anatomical locations
Query neural circuits involved in olfactory processing in the fly brain
What neurotransmitter types are present in the lateral horn region

VirtualFlyBrain MCP server — FAQ

Common questions about connecting and running VirtualFlyBrain.

What data does VirtualFlyBrain MCP server provide?
The server provides access to Drosophila neuroscience data including neural anatomy, circuits, connectivity, and gene expression information from VirtualFlyBrain's curated database. It's designed for researchers querying fruit fly brain structure and function.
How do I connect to the VirtualFlyBrain MCP server?
The server is hosted at https://vfb3-mcp.virtualflybrain.org and uses HTTP transport. Configure your MCP client to connect to this endpoint to query Drosophila neuroscience data.
Is authentication required to use this MCP server?
The registry metadata does not specify authentication requirements. Check VirtualFlyBrain's documentation or try connecting to the hosted endpoint to determine if API keys or credentials are needed.
Can I use this server for non-research applications?
VirtualFlyBrain is a research resource focused on Drosophila neuroscience. Verify the data's licensing and terms of use on the VirtualFlyBrain website before integrating into commercial or non-academic projects.
What query formats does the server support?
The registry provides limited detail on query syntax. Consult VirtualFlyBrain's API documentation or schema documentation to learn the supported query formats and available data fields for neural and genetic queries.

Run VirtualFlyBrain across 60+ AI models, side-by-side

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